2024-07-30 AMI/LW Check-in

2024-07-30 AMI/LW Check-in

Participants

  • @Lily Wang

  • @Alexandra McIsaac

Goals

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Discussion topics

Item

Presenter

Notes

Item

Presenter

Notes

General updates and discussions

 

  • GRC

    • lots of interest in

      • protein FF

      • NA FF

      • lipid FF

    • OPLS is the only one that gets sulfamides right, even more than 2.2.0

      • People want more sulfamide improvements

        • Olaf (Notre Dame) – has done work on sulfamide/sulfonamide FFs. Had success with “skip” dihedrals that skips an atom so it’s two pairs of bonded atoms. H configuration around N helps control sulfamide geometry

        • David Cerutti – CMAPS would be helpful, or a virtual site on bond

        • Julia Rice – higher level of theory + solvated QM might help

    • People having issues with conformer energies

    • Riniker group – reckons RESP charges are unstable and difficult to work with. Using MBIS charges instead

  • Conformer energy analysis

    • Spending the rest of the week on this as a feasibility study

  • NAGL

    • LW – started putting scripts up

 



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Action items

Decisions

 

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