Approach II: different optimization algorithms

 

A valence fit to existing QM small molecule + protein data with a different optimization algorithm.

Overview

Summary

One reason our protein force field candidates may not approach the performance of AMBER force fields may be because we are getting stuck in a nearby local minimum with the L-BFGS optimizer. Using a different optimization algorithm, such as simulated annealing, might get us better results. This is related to the looser torsion priors approach.

GitHub repo/branch

Status

Not started In progress Completed Won't progress

 

 Milestones and metrics

Stage

Milestone/Benchmark

Contributors

Deadline

Status

Stage

Milestone/Benchmark

Contributors

Deadline

Status

Not started In progress Completed

Benchmark

 

 

Passed Failed

 

 

 

 

 

 

Progress and findings

Curated data (or similar title)