RMSD plots

RMSD plots of the MM minimized structures wrt the QM initial geometries for one of the interpolated parameters TIG5, which shows a closer agreement with QM energies in most of the cases, and yet a slightly higher RMSD in almost all of the cases here.

Both the training set of molecules and a test set are shown below.

Legend

tig_proof_of_concept_v130 - interpolated forcefield with 10 interpolated parameters trained on substituted phenyl dataset

off_130_substituted_phenyl_updated - Paramters in Openff-1.3.0 that match to targets in substituted phenyl set refit on this particular dataset

openff-unconstrained-1.3.0 - release version 1.3.0

FF files:

 

Training set of molecules

QCA TD ID

tig, 1.3.0, 1.3.0

ELF10 WBO

Chemical Structure

Relative energies

RMSD

QCA TD ID

tig, 1.3.0, 1.3.0

ELF10 WBO

Chemical Structure

Relative energies

RMSD

3745393

(TIG5, t69, t69)

1.003803

 

 

 

3745368

(TIG5, t69, t69)

0.989518

 

 

 

3745649

(TIG5, t69, t69)

1.014397

 

 

 

3745401

(TIG5, t69, t69)

0.975714

 

 

 

3745615

(TIG5, t69, t69)

1.012633

 

 

 

3745657

(TIG5, t69, t69)

1.009534

 

 

 

3745429

(TIG5, t69, t69)

0.976206

 

 

 

3745615

(TIG5, t69, t69)

1.012633

 

 

 

 

 

 

 

 

Test set of molecules

 

QCA TD ID

tig, 1.3.0, 1.3.0

ELF10 WBO

Chemical Structure

Relative energies

RMSD

QCA TD ID

tig, 1.3.0, 1.3.0

ELF10 WBO

Chemical Structure

Relative energies

RMSD

21540333

(TIG5, t69, t69)

0.977699

 

 

 

1762791

(TIG5, t69, t69)

1.009216

 

 

 

21272373

(TIG5, t69, t69)

0.937321

 

 

 

21540298

(TIG5, t69, t69)

0.981915

 

 

 

1762789

(TIG5, t69, t69)

0.979623

 

 

 

1762151

(TIG5, t69, t69)

1.010008

 

 

 

1762411

(TIG5, t69, t69)

0.970049

 

 

 

1762406

(TIG5, t69, t69)

1.015252

 

 

 

1762389

(TIG5, t69, t69)

0.979855

 

 

 

1762410

(TIG5, t69, t69)

1.012120

 

 

 

 

Test set molecule QCP-1762406 - a closer look at the QM & MM minimized geometries

1762406

(TIG5, t69, t69)

1.015252

 

 

 

Legend:

blue licorice - tig_proof_of_concept FF

yellow licorice - OpenFF-1.3.0

ball & stick - QM geometry

 

One of the frames (frame 6) that shows a deviation in proton position on the central NH group involved in torsion