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Initial approach as suggested stakeholder consensus.

👀 Overview

Summary

GitHub link

Status

NOT STARTED IN PROGRESS COMPLETED WON'T PROGRESS

\uD83D\uDEA9 Milestones and metrics

Stage

Milestone/Benchmark

Contributors

Deadline

Status

Curate training dataset

Work out best level of theory for the training dataset

Alexandra McIsaac , Lily Wang

November 3, 2024

IN PROGRESS

Compute training dataset

NOT STARTED

Curate testing dataset

Compile dataset

NOT STARTED

Compute dataset

NOT STARTED

Determine best NN architecture

Experiment with architecture, comparing GraphSAGE vs Attention-based GNNs with bond features

NOT STARTED

First pass at NN training

Train using just ESPs, dipoles, quadrupoles, perhaps regularizing to RESP charges or MBIS charges if buried atoms are a problem

NOT STARTED

Benchmark

Neural network charge model with low testing error and equivalent or better performance to NAGL in simulations

PASSED FAILED

📊 Progress and findings

Curated data (or similar title)

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