2025-10-01 Cole Lab Check-In (Aus) Meeting Notes

2025-10-01 Cole Lab Check-In (Aus) Meeting Notes

Participants

  • @Daniel Cole

  • @Lily Wang

  • @Finlay Clark

Slides

https://newcastle-my.sharepoint.com/:p:/g/personal/nfc78_newcastle_ac_uk/EfPy7aqjLHZGhsrgPzBZAgYBuSxgqdQzD4kotbBV87fLKQ?e=BvLfOa

Discussion topics

Item

Presenter

Notes

Item

Presenter

Notes

Recent Bespoke/ Transferable Valence Fitting Progress

FC

  • LW: Have you looked at adding neighbours to SMIRKS for transferable fits?

    • FC: Have played around with it but never fully trained and benchmarked FF with neighbour information.

  • DC: When you look at the bespokefit dynamics, do you observe lack of sampling in poorly-fitted regions

    • FC: Yes, but likely that issues with metad protocol are due to irrelevant high energy conformers.

  • DC: Comparing to original bespokefit results on fragments risks loss of accuracy in going from full molecule (used for new bespoke fitting) to fragment

Meeting timings



  • Switch to 11 AM UK time next meeting, then 12 AM.