2025-05-27 FF fitting meeting

2025-05-27 FF fitting meeting

Participants

  1. @Lily Wang

  2. @Jeffrey Wagner

  3. @David Mobley

  4. @Jennifer Clark

https://us06web.zoom.us/rec/share/Fw8TVApq9WfNW291LTIPbB8iQZLBxtYbhohN9B4HE3_zC806IeNWu5wVfsuHbAG2.Xx3wE9tJ0wn8FHo3

Passcode: mFC7?vr5

Discussion topics

Notes

Notes

 

Slide 8

  • JC – What about sulfite, where one of the Os were a C? Then you could still have a negative charge, but it may be covered by this parameter…

    • LW – Would it be symmetric if there were a carbon? I’ll check the data that we have

  • JW: If the issue is that this free sulfate has difference geometry, are we targeting the free ion only or also the functional group?

    • LW: Both should be symmetric, and this new parameter will take care of that.

  • DM: So you’re adding a generic 4 member ring angle for the case where one atom is not a carbon?

    • LW: Yes

  • DM: (Slide 14) Are we sure than our dataset has a high enough resolution to detect the multiple peaks that have been reported for espaloma?

    • LW: I don’t think so, but it’s also outside of our scope for now, we will revisit.

  • DM: (Slide 15) If the regularization is changed by a factor of 5 will we see a meaningful influence. What if you allowed the bond parameters to move where it wanted?

    • LW: It could be interesting to remove regularization for that bond, I can set something up to try that, but loosening the regularization by this amount is a starting point.

 

Action items

Decisions