QM, MM minimum structures of acyclic alkanes

QM versus MM minimized structures of the linear alkanes with the following force field, in which angle a2 optimized to a bad parameter of 94 degrees, not seen on the training set. All the QM and MM minimized geometries overlap though with the final RMSD in angles less than 1 degree.

1. With priors (same as 1.2, penalty_additive 1.0)

With priors (same as 1.2, penalty_additive 1.0)

Initial values

acyclic

Openff_1.3.0

b1, length, [#6X4:1]-[#6X4:2]

1.0

1.5

1.5

b1, k, [#6X4:1]-[#6X4:2]

500.0

487.7

517.2

b83, length, [#6X4:1]-[#1:2]

1.0

1.1

1.1

b83, k, [#6X4:1]-[#1:2]

700.0

699.9

754.1

a1, angle, [*:1]-[#6X4:2]-[*:3]

113.7

104.9

113.7

a1, k, [*:1]-[#6X4:2]-[*:3]

99.2

112.9

99.2

a2, angle, [#1:1]-[#6X4:2]-[#1:3]

90.0

94.1

114.3

a2, k, [#1:1]-[#6X4:2]-[#1:3]

60.0

42.2

66.6

 

QM - in Green

MM minima from the acyclic fit with a2 angle equilibrium at 94 degrees - in Cyan