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24/03/2020

- Discussion of the main ‘question’ for the study and which sub questions we want to answer

  • can we replace pure data with mixture data? I.e with mixture data there is more available, and it allows you to more readily vary the different interactions i.e different types of mixtures, being able to titrate the relative amounts of interactions by varying the concertaions of mixtures etc.

...

SB: Automated test for aggregation - good project for Peter / undergrad?

- Updated plots with bootstrapped uncertainties which now also include std dev in estimated values

...

- How to generalise the results of the alcohol-ester study?

Code Block
| Environment 1   | Environment 2   |   Hmix(x) |   rho(x) |   Vexcess(x) |   Hmix(x) + rho(x) |   Hmix(x) + Vexcess(x) |   rho(x) + Vexcess(x) |
|:----------------|:----------------|----------:|---------:|-------------:|-------------------:|-----------------------:|----------------------:|
| ester           | halogenated     |       123 |      184 |          119 |                123 |                     75 |                   119 |
| alcohol         | ester           |        48 |      134 |          115 |                 28 |                     28 |                   115 |
| alcohol         | ether           |        36 |      136 |          111 |                 23 |                     13 |                   111 |
| halogenated     | amide           |        24 |       37 |           28 |                 20 |                     13 |                    28 |
| alcohol         | alcohol         |        44 |      193 |          169 |                 15 |                     15 |                   169 |
| ether           | halogenated     |        17 |       66 |           64 |                 13 |                     13 |                    64 |
| ketone          | amine           |        20 |       13 |           12 |                 10 |                      9 |                    12 |
| ether           | ketone          |         9 |       14 |            8 |                  9 |                      5 |                     8 |
| ester           | ester           |        10 |       25 |           21 |                  6 |                      4 |                    21 |
| alcohol         | halogenated     |         7 |       92 |           88 |                  6 |                      6 |                    88 |
| alcohol         | amine           |        10 |      125 |           95 |                  6 |                      4 |                    95 |
| alcohol         | ketone          |        38 |       29 |           21 |                  5 |                      5 |                    21 |
| alcohol         | amide           |         4 |       59 |           49 |                  4 |                      4 |                    48 |
| ketone          | amide           |         3 |       16 |           15 |                  3 |                      3 |                    15 |
| amine           | halogenated     |         2 |       26 |           20 |                  2 |                      2 |                    20 |
| ether           | amine           |         5 |       38 |           37 |                  2 |                      3 |                    36 |
| alcohol         | aldehyde        |         6 |       11 |           11 |                  1 |                      1 |                    11 |
| ether           | amide           |         1 |       18 |           14 |                  1 |                      1 |                    14 |
| amine           | amide           |         1 |       16 |           12 |                  1 |                      1 |                    12 |
| aldehyde        | halogenated     |         0 |        3 |            3 |                  0 |                      0 |                     3 |
| halogenated     | nitro           |         0 |       12 |           11 |                  0 |                      0 |                    11 |
| amine           | nitro           |         0 |        3 |            3 |                  0 |                      0 |                     3 |
| aldehyde        | amide           |         0 |        0 |            0 |                  0 |                      0 |                     0 |
| aldehyde        | nitro           |         0 |        1 |            1 |                  0 |                      0 |                     1 |
| ketone          | thiocarbonyl    |         0 |        0 |            0 |                  0 |                      0 |                     0 |
| ketone          | phenol          |         0 |        0 |            0 |                  0 |                      0 |                     0 |
| phenol          | nitro           |         0 |        0 |            0 |                  0 |                      0 |                     0 |
| phenol          | amine           |         0 |        0 |            0 |                  0 |                      0 |                     0 |
| ketone          | halogenated     |         4 |       36 |           35 |                  0 |                      0 |                    35 |
| ketone          | nitro           |         0 |        4 |            4 |                  0 |                      0 |                     4 |
| thiocarbonyl    | phenol          |         0 |        0 |            0 |                  0 |                      0 |                     0 |
| thiocarbonyl    | amine           |         0 |        0 |            0 |                  0 |                      0 |                     0 |
| thiocarbonyl    | halogenated     |         0 |        0 |            0 |                  0 |                      0 |                     0 |
| aldehyde        | phenol          |         0 |        3 |            3 |                  0 |                      0 |                     3 |
| phenol          | amide           |         0 |        0 |            0 |                  0 |                      0 |                     0 |
| phenol          | halogenated     |         0 |        0 |            0 |                  0 |                      0 |                     0 |
| thiocarbonyl    | amide           |         0 |        0 |            0 |                  0 |                      0 |                     0 |
| thiocarbonyl    | nitro           |         0 |        0 |            0 |                  0 |                      0 |                     0 |
| aldehyde        | amine           |         0 |        0 |            0 |                  0 |                      0 |                     0 |
| ether           | phenol          |         0 |        3 |            3 |                  0 |                      0 |                     3 |
| aldehyde        | thiocarbonyl    |         0 |        0 |            0 |                  0 |                      0 |                     0 |
| aldehyde        | ketone          |         1 |        1 |            1 |                  0 |                      0 |                     1 |
| ether           | ether           |         5 |       14 |           13 |                  0 |                      0 |                    13 |
| aldehyde        | aldehyde        |         0 |        0 |            0 |                  0 |                      0 |                     0 |
| ketone          | ketone          |         0 |        2 |            2 |                  0 |                      0 |                     2 |
| thiocarbonyl    | thiocarbonyl    |         0 |        0 |            0 |                  0 |                      0 |                     0 |
| phenol          | phenol          |         0 |        1 |            0 |                  0 |                      0 |                     0 |
| amine           | amine           |         3 |       20 |           20 |                  0 |                      0 |                    20 |
| halogenated     | halogenated     |         2 |       27 |           24 |                  0 |                      0 |                    24 |
| amide           | amide           |         0 |        2 |            2 |                  0 |                      0 |                     2 |
| nitro           | nitro           |         0 |        1 |            1 |                  0 |                      0 |                     1 |
| alcohol         | thiocarbonyl    |         0 |        0 |            0 |                  0 |                      0 |                     0 |
| alcohol         | phenol          |         0 |        8 |            6 |                  0 |                      0 |                     6 |
| alcohol         | nitro           |         0 |       14 |           10 |                  0 |                      0 |                    10 |
| ester           | ether           |         1 |       34 |           32 |                  0 |                      0 |                    32 |
| ester           | aldehyde        |         0 |        0 |            0 |                  0 |                      0 |                     0 |
| ester           | ketone          |         2 |       19 |           19 |                  0 |                      0 |                    19 |
| ester           | thiocarbonyl    |         0 |        0 |            0 |                  0 |                      0 |                     0 |
| ester           | phenol          |         0 |        0 |            0 |                  0 |                      0 |                     0 |
| ester           | amine           |         0 |        5 |            5 |                  0 |                      0 |                     5 |
| ester           | amide           |         1 |       22 |           18 |                  0 |                      0 |                    18 |
| ester           | nitro           |         0 |        4 |            3 |                  0 |                      0 |                     3 |
| ether           | aldehyde        |         1 |        1 |            0 |                  0 |                      0 |                     0 |
| ether           | thiocarbonyl    |         0 |        0 |            0 |                  0 |                      0 |                     0 |
| ether           | nitro           |         0 |       10 |            6 |                  0 |                      0 |                     6 |
| amide           | nitro           |         0 |        4 |            2 |                  0 |                      0 |                     2 |

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