Handoff of compute management for NRP Nautilus | David Dotson/ open discussion | DD: Just met with BP, we have compute workers now DD: NRP Nautilus working as far as we can tell DD: Wants to hand off compute management since he’s not going to have this in his scope next year. Who should it be? LW: Happy to take it over. Should infrastructure be involved? MT: Could be involved, if you think it would be helpful, or could just be you LW: Happy to take it over initially, could revisit if we change our minds
DD: Jeff is officially admin of OpenFF namespace, I might be able to give you permissions but if not may have to wait for Jeff. Once LW has an account, will do a training to show how to manage compute resources, how to manage environments, etc DD: Should start seeing completions on dataset from last meeting soon, got compute up, will try to use 300 workers
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General discussion
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| LW: How are scripts, etc looking in QCA dataset submission? DD: Looking good, should all work now, error cycling reports are showing up again and GitHub label prioritization should be working and compute tagging DD: “Should” be working but haven’t tested it for production DD: Updated TorsionDrive dataset error cycling, should also be working, complicated because they generate their own optimizations DD: Would be good to try a TD dataset soon to see how it’s working
DD: Currently 3 environments, psi4, OpenMM, XTB, also torchani environment which is currently broken but Lily has a fix (downgrade pytorch) DD: Current dataset has one spec (HF/6-31G*). If in the future, you can also add more specs to same dataset by making a PR where you make a compute.json file in same directory instead of a whole new dataset Example: | Github link macro |
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| link | https://github.com/openforcefield/qca-dataset-submission/pull/210 |
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Leave dataset object empty, signifies to QCA that it’s a compute expansion for an existing dataset LW: If you wanted to expand compute specs, would you do so by editing existing compute.json, or make a new one?
DD: Make a new one, it just has to follow compute[*].json, can put other stuff after compute
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