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  • Update on torsion refit targeting MM minima

  • Update on protein benchmarks in GROMACS

Slides

View file
namegmx_openmm_compare.pptx

Discussion topics

Item

Presenter

Notes

Torsion refit targeting MM minimaet’s

Chapin Cavender

Protein benchmarks in GROMACS

Anika Friedman

AF will post slides here.

Slide 1

  • JW – The openmm vs. gromacs results look good

  • LW – The errorbars look pretty big.

    • AF – Yeah, we may need to look into that with CC

  • JW – Hard to say whether we can make use of this - Two Qs - 1) is the analysis technically valid? (huge difference in error bars) 2) if it’s valid, should we be concerned about the error bars?

  • (General) – We’ll add this as an agenda item for the next FF release call (next Thursday at the same time)

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