Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

...

Item

Notes

General updates

  • DD – Should we cancel core devs on gov board days?

    • JW – I’d be happy to move it or cancel it altogether.

    • (Discussion)

    • Decision – We’ll make this every-other weekly, make it a super compact standup (aim for 15 mins)

Individual updates

  • MT

    • Made 0.12.0 toolkit release, some other small features rolling in.

    • Chased down some smoke/little fires in our stack - New toolkit release caused problems in qcsubmit, some wrinkles in bespokefit,

    • Making progress on longer-term charges in interchange. Expect enough changes to have an RC in a few weeks.

  • DD

    • Protein-ligand benchmarks

      • worked with Mike Henry on deployment components; not finished yet, but very close from his perspective

      • got end-to-end testing working for network submission -> transformation task generation -> task actioning -> task execution and result storage -> result retrieval

      • added user client touchpoints for compute and result retrieval

      • working this week to

        • ensure failures are handled well

        • adding GPU support to synchronous compute service

      • onboarding Hugo MacDermott-Opeskin for work on fah-alchemy

    • QCArchive

  • PB

    • Got back on Friday.

    • Got things together for sage paper submission to JCTC.

    • Got back into the fitting work I was doing before vacation (working with BSwope on ddE stuff)

    • CC: TG and I started using simulated annealing as a global optimizer. It showed really significant improvement. We’ve seen objective drops of around 80%.

      • CC – I’m very interested in that, let’s talk outside this meeting.

  • CC

    • FB parameter fit for protein-specific model completed

    • Running QC validation for protein-null and protein-specific force fields - will give details in protein FF meeting on Thursday this week

    • Working toward setting up automated NMR benchmarks for peptides and folded proteins. I will hand this off to LWang to run on Lilac when this is ready

    • MGilson and I made substantial revisions to LiveCoMS review and sent out to external authors. Expecting comments back Monday, Jan 16.

  • JW

    • Trying to clear OFFTK PR backlog, made it through about half last week

    • Updated OE license - Let me know if you have trouble with CI

    • Became convinced that it’s slightly better for fork forcebalance than not. Talking to gov board about it today.

    • Working on new PM job description in conjunction with OpenFE

Action items

  •  

Decisions