...
- Change
topology-biopolymer-refactor
tomain
- Update GH settings to make
main
default - Update PRs to
topology-biopolyer-refactor
to point tomain
- Change
master
to0-10-x
- Update PRs to
master
to point to0-10-x
- Make RC tag on openff-toolkit
- Make RC tag on openff-interchange
-
Github link macro link https://github.com/openforcefield/openff-interchange/releases/tag/v0.2.0-alpha.6 - Make openff-toolkit package on rc channel WITHOUT interchange
- Update deps, but don’t add interchange
- Remove
create_openmm_system
line in conda-forge builds - Make conda package
- make openff-interchange package on rc channel
- Update deps to pin to openff-toolkit 0.11.0rc1,
- Update
channel_sources
to includeconda-forge/label/openff-toolkit-rc
- Make openff-toolkit package on rc channel WITH interchange
- Add interchange to openff-toolkit-base recipe
- Add
openff-interchange
toopenff-toolkit
deps, NOTopenff-toolkit-base
- Update
channel_sources
to includeconda-forge/label/openff-interchange-rc
- Re-enable create_openmm_system test
- Update alpha notebook to use conda package (and anywhere else)
- Make code changes
-
Make missing interchange error not imply that interchange is “Optional” - OE PDB → lots of stereochemistry warnings
- OE atom indices in written PDB are all 0
-
OE bfactors are lost -
OE standard residues shouldn’t have CONECT records - Insertion code handling
- Fix
from_polymer_pdb
docstring (metadata goes into atom.metadata) - RDKit PDB writing misformats things somehow (run pre alpha notebook and try to visualize)
- ensure_unique_atom_names ported to Interchange https://github.com/openforcefield/openff-interchange/pull/510/files
Github link macro link https://github.com/openforcefield/openff-toolkit/pull/1376 Github link macro link https://github.com/openforcefield/openff-toolkit/pull/1325 - Check box on interchange regression testing
- Docs updates
- Mention that vsites are no longer at the end of topologies (in SB’s docs page)
- Verify that examples are up to date
- Verify they all run
- Verify that at least one talks about new areas of APIs
- Update Toolkit Showcase
- Downstream packages ready
- Downpin builds
- OpenMMForceFields
- Evaluator
- ForceBalance
- Fragmenter
- QCSubmit
- BespokeFit
- Recharge
- Code ready for new release
- OpenMMForceFields
Github link macro link https://github.com/openmm/openmmforcefields/pull/225 - Evaluator
- ForceBalance
Github link macro link https://github.com/leeping/forcebalance/pull/259 - BespokeFit
- Run CI after release to see if it breaks
- Fragmenter
- QCSubmit
- Recharge
- Make new tag for Toolkit and interchange if needed
- Make new conda packages
- Don’t strict-pin the other package
- Announce RC period
...